PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00939.1.g00110.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 295aa    MW: 31263.3 Da    PI: 4.5596
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00939.1.g00110.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-2094144155
                           AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                   ++++GVr+++ +g+++AeIrd +     r  r++lg+f+taeeAa+ ++ a+ +l+g
  Zpz_sc00939.1.g00110.1.sm.mk  94 TKFRGVRRRP-WGKYAAEIRDpW-----RgVRVWLGTFDTAEEAARVYDSAAIQLRG 144
                                   69********.**********88.....55*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.34E-2894151No hitNo description
PfamPF008471.2E-1294144IPR001471AP2/ERF domain
SMARTSM003803.0E-3595158IPR001471AP2/ERF domain
PROSITE profilePS5103222.98595152IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-2195153IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.2E-2995152IPR001471AP2/ERF domain
PRINTSPR003672.0E-1096107IPR001471AP2/ERF domain
PRINTSPR003672.0E-10118134IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MSRSRTVRIF WDDPDVTDSS GEEDGYGTRK VGRMVRELPP VEVAAAAAGA GVVMPEQCSA  60
GDGDRGRRAA TSGPRGCSGA RRLGKGAGSV VQGTKFRGVR RRPWGKYAAE IRDPWRGVRV  120
WLGTFDTAEE AARVYDSAAI QLRGPNTTTN FSATATDSGG SGGGHQDQVT AGYESGAESS  180
PAVSSPTSVL RKVPSLSSLA DKDEPAAECR LAALEELGEF VPFEDAPVYT SNSSFWDFEP  240
DAAGFLYAEP SSPETTWDAA ATTSASSGAA PVHQENDYFQ DLRDLFPLNP LPAIF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-1992151262ATERF1
3gcc_A9e-1992151262ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006644464.11e-131PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like
TrEMBLJ3L2I61e-131J3L2I6_ORYBR; Uncharacterized protein
STRINGOB01G34420.11e-131(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.18e-29cytokinin response factor 4